European Rabbits Have High Gene Flow in German Cities But Not Other EU Cities

Many organisms seem to do poorly in urban areas, and it is unclear which organisms will become extirpated in cities. Typically, organisms that are experiencing population declines are ones that we would think are negatively impacted by urbanization. However, this may not always be the case.

Figure 1. As the urbanity index (level of urbanization) increases, FIS (the level of inbreeding) reduces.

Recently, Ziege and co-authors studied populations of the European rabbit (Oryctolagus cuniculus) which has been declining throughout Europe. Interestingly, there are populations in German cities that seem to be in high abundance compared to many of the other populations throughout Europe. Researchers collected samples along an urban to rural gradient in one of these German cities of Frankfurt. They genotyped 10 microsatellite markers and found that genetic diversity was higher in the urban populations than the rural ones. They also found that inbreeding was lower in urban populations (Figure 1).

Figure 2. (from Ziege et al 2020). a) DAPC of each sampled individual shows overlap in PC space which means that there is gene flow among these populations. b) commoplot which shows the proportion assignment to populations that has individuals with mixed population assignment, again suggesting gene flow between populations.

Although there appears to be some genetic structure by population (Figure 2), this doesn’t seem to influence the overall population negatively, which is the case for many other organisms. Additionally, there was a significant effect of “urbanity” on genetic distance, but this does not seem to negatively influence the populations. The rabbit populations have significant genetic differences between them, but inbreeding is low and genetic diversity is high.

Overall, the researchers found that urbanization seems to have a positive effect on these rabbits, at least in the green city of Frankfurt. It is possible that the city’s green initiatives have provided sufficient habitat heterogeneity and resources for the rabbits established there that they are able to thrive, despite declines in other European cities.

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